Human SNP ID | rs1333042 |
---|---|
Human chromosome | chr9 |
Human SNP position | 22103814 |
Pig chromosome | chr1 |
Pig SNP position | 223820513 |
PubMed ID | 23364394 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23364394 |
Study | A genome-wide association study of a coronary artery disease risk variant. |
Disease/Trait | Coronary heart disease |
Initial sample | 2,123 Korean ancestry cases, 3,591 Korean ancestry controls |
Replication sample | 3,052 Japanese ancestry cases, 4,976 Japanese ancestry controls |
Region | 9p21.3 |
Chromosome id | chr9 |
Chromosome position | 22103814 |
Reported gene | CDKN2A/2B |
Mapped gene | CDKN2B-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100048912 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1333042-? |
SNPs | rs1333042 |
Merged | 0 |
SNP id current | 1333042 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 1.3 |
%95 Ci | [1.19-1.41] |
Platform | Affymetrix [521786] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST001845 |