SNP Detail For rs13315871
1.Mapping Information
Human SNP ID rs13315871
Human chromosome chr3
Human SNP position 58395560
Pig chromosome chr13
Pig SNP position 44091822
2.Annotation Information
PubMed ID24097068
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24097068
StudyDiscovery and refinement of loci associated with lipid levels.
Disease/TraitCholesterol, total
Initial sample94,595 European ancestry individuals
Replication sample93,982 European ancestry individuals
Region3p14.3
Chromosome idchr3
Chromosome position58395560
Reported genePXK
Mapped genePXK
Upstream gene id
Downstream gene id
SNP gene ids54899
Upstream gene distance
Downstream gene distance
SNP risk allelers13315871-A
SNPsrs13315871
Merged0
SNP id current13315871
Contextintron_variant
Intergenic0
Allele frequency0.1
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.036
%95 Ci[NR] unit decrease
PlatformNR [NR] (imputed)
CNVN
Mapped traittotal cholesterol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004574
Study accessionGCST002221