Human SNP ID | rs13315871 |
---|---|
Human chromosome | chr3 |
Human SNP position | 58395560 |
Pig chromosome | chr13 |
Pig SNP position | 44091822 |
PubMed ID | 24097068 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | Cholesterol, total |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 3p14.3 |
Chromosome id | chr3 |
Chromosome position | 58395560 |
Reported gene | PXK |
Mapped gene | PXK |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54899 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13315871-A |
SNPs | rs13315871 |
Merged | 0 |
SNP id current | 13315871 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.1 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 0.036 |
%95 Ci | [NR] unit decrease |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | total cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004574 |
Study accession | GCST002221 |