Human SNP ID | rs1329650 |
---|---|
Human chromosome | chr10 |
Human SNP position | 91588363 |
Pig chromosome | chr14 |
Pig SNP position | 112617317 |
PubMed ID | 20418890 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20418890 |
Study | Genome-wide meta-analyses identify multiple loci associated with smoking behavior. |
Disease/Trait | Smoking behavior |
Initial sample | Up to 74,035 European ancestry individuals |
Replication sample | Up to 68,988 participants |
Region | 10q23.32 |
Chromosome id | chr10 |
Chromosome position | 91588363 |
Reported gene | LOC100188947 |
Mapped gene | HECTD2-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100188947 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1329650-T |
SNPs | rs1329650 |
Merged | 0 |
SNP id current | 1329650 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.0000000006 |
Pvalue mlog | 9.22184874961635 |
P value text | (CPD) |
Or beta | 0.37 |
%95 Ci | [0.25-0.49] CPD decrease |
Platform | Affymetrix, Illumina, Perlegen [~ 2500000] (imputed) |
CNV | N |
Mapped trait | smoking behavior |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004318 |
Study accession | GCST000666 |