Human SNP ID | rs1326986 |
---|---|
Human chromosome | chr10 |
Human SNP position | 19640584 |
Pig chromosome | chr10 |
Pig SNP position | 60743864 |
PubMed ID | 20062062 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20062062 |
Study | Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci. |
Disease/Trait | Ankylosing spondylitis |
Initial sample | 2,053 European ancestry cases, 5,140 European ancestry controls |
Replication sample | 898 European ancestry cases, 1,518 European ancestry controls |
Region | 10p12.31 |
Chromosome id | chr10 |
Chromosome position | 19640584 |
Reported gene | NR |
Mapped gene | MALRD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 340895 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1326986-C |
SNPs | rs1326986 |
Merged | 0 |
SNP id current | 1326986 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.9 |
%95 Ci | [1.58-2.29] |
Platform | Illumina [288662] |
CNV | N |
Mapped trait | ankylosing spondylitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003898 |
Study accession | GCST000563 |