SNP Detail For rs1326986
1.Mapping Information
Human SNP ID rs1326986
Human chromosome chr10
Human SNP position 19640584
Pig chromosome chr10
Pig SNP position 60743864
2.Annotation Information
PubMed ID20062062
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20062062
StudyGenome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci.
Disease/TraitAnkylosing spondylitis
Initial sample2,053 European ancestry cases, 5,140 European ancestry controls
Replication sample898 European ancestry cases, 1,518 European ancestry controls
Region10p12.31
Chromosome idchr10
Chromosome position19640584
Reported geneNR
Mapped geneMALRD1
Upstream gene id
Downstream gene id
SNP gene ids340895
Upstream gene distance
Downstream gene distance
SNP risk allelers1326986-C
SNPsrs1326986
Merged0
SNP id current1326986
Contextintron_variant
Intergenic0
Allele frequency0.05
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.9
%95 Ci[1.58-2.29]
PlatformIllumina [288662]
CNVN
Mapped traitankylosing spondylitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003898
Study accessionGCST000563