Human SNP ID | rs1325765 |
---|---|
Human chromosome | chr20 |
Human SNP position | 48040246 |
Pig chromosome | chr17 |
Pig SNP position | 56403339 |
PubMed ID | 25562672 |
---|---|
Journal | J Clin Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25562672 |
Study | Seasonality shows evidence for polygenic architecture and genetic correlation with schizophrenia and bipolar disorder. |
Disease/Trait | Seasonality |
Initial sample | 3,269 European ancestry individuals |
Replication sample | 887 Old order Amish individuals |
Region | 20q13.13 |
Chromosome id | chr20 |
Chromosome position | 48040246 |
Reported gene | MIR1204, PVT1 |
Mapped gene | LOC105372639 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105372639 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1325765-T |
SNPs | rs1325765 |
Merged | 0 |
SNP id current | 1325765 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.83 |
%95 Ci | [0.50-1.16] unit decrease |
Platform | Affymetrix, Illumina [2354422] (imputed) |
CNV | N |
Mapped trait | seasonality measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006876 |
Study accession | GCST002719 |