SNP Detail For rs1325765
1.Mapping Information
Human SNP ID rs1325765
Human chromosome chr20
Human SNP position 48040246
Pig chromosome chr17
Pig SNP position 56403339
2.Annotation Information
PubMed ID25562672
JournalJ Clin Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25562672
StudySeasonality shows evidence for polygenic architecture and genetic correlation with schizophrenia and bipolar disorder.
Disease/TraitSeasonality
Initial sample3,269 European ancestry individuals
Replication sample887 Old order Amish individuals
Region20q13.13
Chromosome idchr20
Chromosome position48040246
Reported geneMIR1204, PVT1
Mapped geneLOC105372639
Upstream gene id
Downstream gene id
SNP gene ids105372639
Upstream gene distance
Downstream gene distance
SNP risk allelers1325765-T
SNPsrs1325765
Merged0
SNP id current1325765
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.83
%95 Ci[0.50-1.16] unit decrease
PlatformAffymetrix, Illumina [2354422] (imputed)
CNVN
Mapped traitseasonality measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006876
Study accessionGCST002719