SNP Detail For rs13254990
1.Mapping Information
Human SNP ID rs13254990
Human chromosome chr8
Human SNP position 128064205
Pig chromosome chr4
Pig SNP position 12551758
2.Annotation Information
PubMed ID25279986
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25279986
StudyGenome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region.
Disease/TraitFollicular lymphoma
Initial sample2,728 European ancestry cases, 7,758 European ancestry controls
Replication sample1,795 European ancestry cases, 5,586 European ancestry controls
Region8q24.21
Chromosome idchr8
Chromosome position128064205
Reported genePVT1
Mapped genePVT1
Upstream gene id
Downstream gene id
SNP gene ids5820
Upstream gene distance
Downstream gene distance
SNP risk allelers13254990-T
SNPsrs13254990
Merged0
SNP id current13254990
Contextintron_variant
Intergenic0
Allele frequency0.315
P value0.00000001
Pvalue mlog8
P value text
Or beta1.18
%95 Ci[1.11-1.24]
PlatformIllumina [up to 21554489]
CNVN
Mapped traitneoplasm of mature B-cells
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000096
Study accessionGCST002643