SNP Detail For rs1324183
1.Mapping Information
Human SNP ID rs1324183
Human chromosome chr9
Human SNP position 13557492
Pig chromosome chr1
Pig SNP position 232738695
2.Annotation Information
PubMed ID23291589
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23291589
StudyGenome-wide association analyses identify multiple loci associated with central corneal thickness and keratoconus.
Disease/TraitCorneal structure
Initial sample13,057 European ancestry individuals, 2,538 Indian ancestry individuals, 2,542 Malay ancestry individuals, 1,883 Chinese ancestry individuals
Replication sampleNA
Region9p23
Chromosome idchr9
Chromosome position13557492
Reported geneNF1B, MPDZ
Mapped geneLOC105375977 - LOC101929507
Upstream gene id105375977
Downstream gene id101929507
SNP gene ids
Upstream gene distance69966
Downstream gene distance250806
SNP risk allelers1324183-A
SNPsrs1324183
Merged0
SNP id current1324183
Contextintergenic_variant
Intergenic1
Allele frequency0.2
P value0.000000008
Pvalue mlog8.09691001300805
P value text
Or beta0.05
%95 Ci[0.011-0.089] unit decrease
PlatformAffymetrix, Illumina [~ 1000000] (imputed)
CNVN
Mapped traitcorneal topography
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004345
Study accessionGCST001806