SNP Detail For rs13236689
1.Mapping Information
Human SNP ID rs13236689
Human chromosome chr7
Human SNP position 80606698
Pig chromosome chr9
Pig SNP position 110220323
2.Annotation Information
PubMed ID22423221
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22423221
StudyA meta-analysis and genome-wide association study of platelet count and mean platelet volume in african americans.
Disease/TraitMean platelet volume
Initial sample16,388 African American individuals
Replication sampleNA
Region7q21.11
Chromosome idchr7
Chromosome position80606698
Reported geneCD36
Mapped geneCD36
Upstream gene id
Downstream gene id
SNP gene ids948
Upstream gene distance
Downstream gene distance
SNP risk allelers13236689-T
SNPsrs13236689
Merged0
SNP id current13236689
Contextintron_variant
Intergenic0
Allele frequency0.436
P value0.000000003
Pvalue mlog8.52287874528033
P value text(Platelet Count)
Or beta4.18
%95 Ci[2.81-5.55] 10^9 L increase
PlatformAffymetrix, Illumina [~ 2200000] (imputed)
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001439