SNP Detail For rs13217797
1.Mapping Information
Human SNP ID rs13217797
Human chromosome chr6
Human SNP position 25485786
Pig chromosome chr7
Pig SNP position 21524694
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6p22.2
Chromosome idchr6
Chromosome position25485786
Reported geneNR
Mapped geneLRRC16A
Upstream gene id
Downstream gene id
SNP gene ids55604
Upstream gene distance
Downstream gene distance
SNP risk allelers13217797-T
SNPsrs13217797
Merged
SNP id current13217797
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.06
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048