SNP Detail For rs1318606
1.Mapping Information
Human SNP ID rs1318606
Human chromosome chr6
Human SNP position 6331703
Pig chromosome chr7
Pig SNP position 4113261
2.Annotation Information
PubMed ID23381943
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/23381943
StudyIschemic stroke is associated with the ABO locus: the EuroCLOT study.
Disease/TraitEnd-stage coagulation
Initial sample2,100 European ancestry individuals
Replication sampleNA
Region6p25.1
Chromosome idchr6
Chromosome position6331703
Reported geneF13A1
Mapped geneLOC105374899 - LY86-AS1
Upstream gene id105374899
Downstream gene id285780
SNP gene ids
Upstream gene distance5429
Downstream gene distance14762
SNP risk allelers1318606-T
SNPsrs1318606
Merged0
SNP id current1318606
Contextregulatory_region_variant
Intergenic1
Allele frequency0.569
P value0.00000000000000004
Pvalue mlog16.397940008672
P value text(FXIIIA)
Or beta0.273
%95 Ci[0.21-0.34] unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitcoagulation factor measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004634
Study accessionGCST001798