Human SNP ID | rs1317082 |
---|---|
Human chromosome | chr3 |
Human SNP position | 169779797 |
Pig chromosome | chr13 |
Pig SNP position | 117168566 |
PubMed ID | 23001564 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23001564 |
Study | Genome-wide meta-analysis points to CTC1 and ZNF676 as genes regulating telomere homeostasis in humans. |
Disease/Trait | Telomere length |
Initial sample | 9,190 European ancestry individuals |
Replication sample | 2,226 individuals |
Region | 3q26.2 |
Chromosome id | chr3 |
Chromosome position | 169779797 |
Reported gene | TERC |
Mapped gene | MYNN |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55892 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1317082-G |
SNPs | rs1317082 |
Merged | 0 |
SNP id current | 1317082 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.2875 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.0679 |
%95 Ci | [0.046-0.089] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | telomere length |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004505 |
Study accession | GCST001697 |