Human SNP ID | rs13166814 |
---|---|
Human chromosome | chr5 |
Human SNP position | 118002058 |
Pig chromosome | chr2 |
Pig SNP position | 127195415 |
PubMed ID | 22589738 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22589738 |
Study | Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. |
Disease/Trait | Subcutaneous adipose tissue |
Initial sample | 5,560 European ancestry female individuals, 4,997 European ancestry male individuals |
Replication sample | NA |
Region | 5q23.1 |
Chromosome id | chr5 |
Chromosome position | 118002058 |
Reported gene | DTWD2 |
Mapped gene | LOC102467224 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 102467224 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13166814-A |
SNPs | rs13166814 |
Merged | 0 |
SNP id current | 13166814 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (men) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | subcutaneous adipose tissue measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004766 |
Study accession | GCST001521 |