Human SNP ID | rs13152543 |
---|---|
Human chromosome | chr4 |
Human SNP position | 84656388 |
Pig chromosome | chr8 |
Pig SNP position | 143425808 |
PubMed ID | 26252872 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26252872 |
Study | Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aå°¾1-42 Level. |
Disease/Trait | Cerebral amyloid deposition (PET imaging) |
Initial sample | up to 883 European and other ancestry individuals |
Replication sample | NA |
Region | 4q21.23 |
Chromosome id | chr4 |
Chromosome position | 84656388 |
Reported gene | CDS1, WDFY3 |
Mapped gene | CDS1 - WDFY3 |
Upstream gene id | 1040 |
Downstream gene id | 23001 |
SNP gene ids | |
Upstream gene distance | 5048 |
Downstream gene distance | 13149 |
SNP risk allele | rs13152543-A |
SNPs | rs13152543 |
Merged | |
SNP id current | 13152543 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.01 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (correcting APOE e4) |
Or beta | 0.2007 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 9000000] (imputed) |
CNV | N |
Mapped trait | cerebral amyloid deposition measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007707 |
Study accession | GCST003073 |