SNP Detail For rs13117816
1.Mapping Information
Human SNP ID rs13117816
Human chromosome chr4
Human SNP position 37062709
Pig chromosome chr8
Pig SNP position 30007568
2.Annotation Information
PubMed ID20802204
JournalBrain
Linkwww.ncbi.nlm.nih.gov/pubmed/20802204
StudyGenetic variation influences glutamate concentrations in brains of patients with multiple sclerosis.
Disease/TraitMultiple sclerosis--Brain Glutamate Levels
Initial sample382 cases
Replication sampleNA
Region4p14
Chromosome idchr4
Chromosome position37062709
Reported geneFLJ11017
Mapped geneLOC100508631 - LOC101928721
Upstream gene id100508631
Downstream gene id101928721
SNP gene ids
Upstream gene distance42003
Downstream gene distance10943
SNP risk allelers13117816-?
SNPsrs13117816
Merged0
SNP id current13117816
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [~ 500000]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000783