SNP Detail For rs13116011
1.Mapping Information
Human SNP ID rs13116011
Human chromosome chr4
Human SNP position 136424394
Pig chromosome chr8
Pig SNP position 95882026
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels (BMI interaction)
Initial sampleup to 15,007 European ancestry male individuals, up to 16,943 European ancestry female individuals
Replication sampleNA
Region4q28.3
Chromosome idchr4
Chromosome position136424394
Reported genePABPC4L, PCDH18
Mapped geneTERF1P3 - LOC105377440
Upstream gene id646316
Downstream gene id105377440
SNP gene ids
Upstream gene distance68057
Downstream gene distance266183
SNP risk allelers13116011-T
SNPsrs13116011
Merged0
SNP id current13116011
Contextintergenic_variant
Intergenic1
Allele frequency0.84
P value0.0000009
Pvalue mlog6.04575749056067
P value text(Men)
Or beta0.019576594
%95 Ci[0.012-0.027] unit increase
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002826