Human SNP ID | rs13100563 |
---|---|
Human chromosome | chr3 |
Human SNP position | 60076299 |
Pig chromosome | chr13 |
Pig SNP position | 45892147 |
PubMed ID | 25644384 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25644384 |
Study | Genetic contributions to variation in general cognitive function: a meta-analysis of genome-wide association studies in the CHARGE consortium (N=53鈥?49). |
Disease/Trait | Cognitive function |
Initial sample | 51,719 European ancestry individuals 1,473 Erasmus Rupchen Family individuals, 327 Korculan individuals, 430 Orcadian individuals |
Replication sample | NA |
Region | 3p14.2 |
Chromosome id | chr3 |
Chromosome position | 60076299 |
Reported gene | FHIT |
Mapped gene | FHIT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2272 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13100563-? |
SNPs | rs13100563 |
Merged | 0 |
SNP id current | 13100563 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.0393 |
%95 Ci | [0.022-0.056] unit decrease |
Platform | Affymetrix, Illumina [2478500] (imputed) |
CNV | N |
Mapped trait | cognition |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003925 |
Study accession | GCST002774 |