Human SNP ID | rs13085837 |
---|---|
Human chromosome | chr3 |
Human SNP position | 15362696 |
Pig chromosome | chr13 |
Pig SNP position | 2539344 |
PubMed ID | 25130324 |
---|---|
Journal | Genes Brain Behav |
Link | www.ncbi.nlm.nih.gov/pubmed/25130324 |
Study | A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus. |
Disease/Trait | Heschl__s gyrus morphology |
Initial sample | 1,778 European ancestry individuals, 1,276 individuals |
Replication sample | NA |
Region | 3p25.1 |
Chromosome id | chr3 |
Chromosome position | 15362696 |
Reported gene | SH3BP5 |
Mapped gene | SH3BP5 - HMGN2P7 |
Upstream gene id | 9467 |
Downstream gene id | 644498 |
SNP gene ids | |
Upstream gene distance | 21302 |
Downstream gene distance | 11557 |
SNP risk allele | rs13085837-A |
SNPs | rs13085837 |
Merged | 0 |
SNP id current | 13085837 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.12 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Right HG area) |
Or beta | 7.41 |
%95 Ci | unit decrease |
Platform | Affymetrix, Illumina [4103035] (imputed) |
CNV | N |
Mapped trait | Heschl__s gyrus morphology measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005852 |
Study accession | GCST002579 |