Human SNP ID | rs13077101 |
---|---|
Human chromosome | chr3 |
Human SNP position | 120706484 |
Pig chromosome | JH118974-1 |
Pig SNP position | 178403 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 3q13.33 |
Chromosome id | chr3 |
Chromosome position | 120706484 |
Reported gene | GTF2E1, RABL3 |
Mapped gene | RABL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 285282 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13077101-G |
SNPs | rs13077101 |
Merged | 0 |
SNP id current | 13077101 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.177 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (AST/ALT) |
Or beta | 0.03 |
%95 Ci | [NR] unit increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement, serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST001762 |
PubMed ID | 23251661 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 3q13.33 |
Chromosome id | chr3 |
Chromosome position | 120706484 |
Reported gene | GTF2E1, RABL3 |
Mapped gene | RABL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 285282 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13077101-G |
SNPs | rs13077101 |
Merged | 0 |
SNP id current | 13077101 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.177 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (ALT/AST) |
Or beta | 0.03 |
%95 Ci | [NR] unit increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement, serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736, http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST001762 |