Human SNP ID | rs13069000 |
---|---|
Human chromosome | chr3 |
Human SNP position | 66748526 |
Pig chromosome | chr13 |
Pig SNP position | 53012906 |
PubMed ID | 22797727 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22797727 |
Study | Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. |
Disease/Trait | Renal function-related traits (BUN) |
Initial sample | 39,717 East Asian ancestry individuals |
Replication sample | 17,461 East Asian ancestry individuals |
Region | 3p14.1 |
Chromosome id | chr3 |
Chromosome position | 66748526 |
Reported gene | LRIG1, KBTBD8 |
Mapped gene | LOC105377143 - LOC105377144 |
Upstream gene id | 105377143 |
Downstream gene id | 105377144 |
SNP gene ids | |
Upstream gene distance | 10212 |
Downstream gene distance | 31551 |
SNP risk allele | rs13069000-G |
SNPs | rs13069000 |
Merged | 0 |
SNP id current | 13069000 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.17 |
P value | 1E-19 |
Pvalue mlog | 19 |
P value text | |
Or beta | 0.0093 |
%95 Ci | [0.0073-0.0113] mg/dl increase |
Platform | Affymetrix, Illumina [2281523] (imputed) |
CNV | N |
Mapped trait | renal system measurement, blood urea nitrogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004742, http://www.ebi.ac.uk/efo/EFO_0004741 |
Study accession | GCST001610 |