SNP Detail For rs13069000
1.Mapping Information
Human SNP ID rs13069000
Human chromosome chr3
Human SNP position 66748526
Pig chromosome chr13
Pig SNP position 53012906
2.Annotation Information
PubMed ID22797727
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22797727
StudyMeta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
Disease/TraitRenal function-related traits (BUN)
Initial sample39,717 East Asian ancestry individuals
Replication sample17,461 East Asian ancestry individuals
Region3p14.1
Chromosome idchr3
Chromosome position66748526
Reported geneLRIG1, KBTBD8
Mapped geneLOC105377143 - LOC105377144
Upstream gene id105377143
Downstream gene id105377144
SNP gene ids
Upstream gene distance10212
Downstream gene distance31551
SNP risk allelers13069000-G
SNPsrs13069000
Merged0
SNP id current13069000
Contextintergenic_variant
Intergenic1
Allele frequency0.17
P value1E-19
Pvalue mlog19
P value text
Or beta0.0093
%95 Ci[0.0073-0.0113] mg/dl increase
PlatformAffymetrix, Illumina [2281523] (imputed)
CNVN
Mapped traitrenal system measurement, blood urea nitrogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004742, http://www.ebi.ac.uk/efo/EFO_0004741
Study accessionGCST001610