SNP Detail For rs13067593
1.Mapping Information
Human SNP ID rs13067593
Human chromosome chr3
Human SNP position 188866891
Pig chromosome chr13
Pig SNP position 135541546
2.Annotation Information
PubMed ID22610502
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22610502
StudyGenome-wide analysis of polymorphisms associated with cytokine responses in smallpox vaccine recipients.
Disease/TraitImmune reponse to smallpox (secreted IFN-alpha)
Initial sampleUp to 512 European ancestry individuals, up to 199 African American individuals
Replication sampleNA
Region3q28
Chromosome idchr3
Chromosome position188866891
Reported geneLPP
Mapped geneLPP
Upstream gene id
Downstream gene id
SNP gene ids4026
Upstream gene distance
Downstream gene distance
SNP risk allelers13067593-G
SNPsrs13067593
Merged0
SNP id current13067593
Contextintron_variant
Intergenic0
Allele frequency
P value0.00000008
Pvalue mlog7.09691001300805
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine, cytokine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645, http://www.ebi.ac.uk/efo/EFO_0004873
Study accessionGCST001538