Human SNP ID | rs13058467 |
---|---|
Human chromosome | chr22 |
Human SNP position | 43183043 |
Pig chromosome | chr5 |
Pig SNP position | 3128753 |
PubMed ID | 23918034 |
---|---|
Journal | Clin Oral Investig |
Link | www.ncbi.nlm.nih.gov/pubmed/23918034 |
Study | Genome-wide association study (GWAS) for molar-incisor hypomineralization (MIH). |
Disease/Trait | Molar-incisor hypomineralization |
Initial sample | 88 European ancestry cases, 580 European ancestry controls |
Replication sample | NA |
Region | 22q13.2 |
Chromosome id | chr22 |
Chromosome position | 43183043 |
Reported gene | SCUBE1, TTLL12 |
Mapped gene | TTLL12 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23170 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13058467-C |
SNPs | rs13058467 |
Merged | 0 |
SNP id current | 13058467 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.104 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 4.4 |
%95 Ci | [2.5-7.8] |
Platform | Affymetrix [2013491] (imputed) |
CNV | N |
Mapped trait | molar-incisor hypomineralization |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005321 |
Study accession | GCST002114 |