SNP Detail For rs13058467
1.Mapping Information
Human SNP ID rs13058467
Human chromosome chr22
Human SNP position 43183043
Pig chromosome chr5
Pig SNP position 3128753
2.Annotation Information
PubMed ID23918034
JournalClin Oral Investig
Linkwww.ncbi.nlm.nih.gov/pubmed/23918034
StudyGenome-wide association study (GWAS) for molar-incisor hypomineralization (MIH).
Disease/TraitMolar-incisor hypomineralization
Initial sample88 European ancestry cases, 580 European ancestry controls
Replication sampleNA
Region22q13.2
Chromosome idchr22
Chromosome position43183043
Reported geneSCUBE1, TTLL12
Mapped geneTTLL12
Upstream gene id
Downstream gene id
SNP gene ids23170
Upstream gene distance
Downstream gene distance
SNP risk allelers13058467-C
SNPsrs13058467
Merged0
SNP id current13058467
Contextmissense_variant
Intergenic0
Allele frequency0.104
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta4.4
%95 Ci[2.5-7.8]
PlatformAffymetrix [2013491] (imputed)
CNVN
Mapped traitmolar-incisor hypomineralization
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005321
Study accessionGCST002114