SNP Detail For rs13048019
1.Mapping Information
Human SNP ID rs13048019
Human chromosome chr21
Human SNP position 31545981
Pig chromosome chr13
Pig SNP position 205535273
2.Annotation Information
PubMed ID20801718
JournalLancet Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/20801718
StudyChromosome 9p21 in amyotrophic lateral sclerosis in Finland: a genome-wide association study.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample405 European ancestry cases, 497 European ancestry controls
Replication sampleNA
Region21q22.11
Chromosome idchr21
Chromosome position31545981
Reported geneSOD1
Mapped geneTIAM1
Upstream gene id
Downstream gene id
SNP gene ids7074
Upstream gene distance
Downstream gene distance
SNP risk allelers13048019-T
SNPsrs13048019
Merged0
SNP id current13048019
Contextintron_variant
Intergenic0
Allele frequency0.17
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta2.02
%95 Ci[1.61-2.53]
PlatformIllumina [318167]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST000781