Human SNP ID | rs13048019 |
---|---|
Human chromosome | chr21 |
Human SNP position | 31545981 |
Pig chromosome | chr13 |
Pig SNP position | 205535273 |
PubMed ID | 20801718 |
---|---|
Journal | Lancet Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/20801718 |
Study | Chromosome 9p21 in amyotrophic lateral sclerosis in Finland: a genome-wide association study. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 405 European ancestry cases, 497 European ancestry controls |
Replication sample | NA |
Region | 21q22.11 |
Chromosome id | chr21 |
Chromosome position | 31545981 |
Reported gene | SOD1 |
Mapped gene | TIAM1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7074 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs13048019-T |
SNPs | rs13048019 |
Merged | 0 |
SNP id current | 13048019 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.17 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 2.02 |
%95 Ci | [1.61-2.53] |
Platform | Illumina [318167] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST000781 |