SNP Detail For rs1302019
1.Mapping Information
Human SNP ID rs1302019
Human chromosome chr6
Human SNP position 147650438
Pig chromosome chr1
Pig SNP position 20351365
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region6q24.3
Chromosome idchr6
Chromosome position147650438
Reported geneintergenic
Mapped geneSAMD5
Upstream gene id
Downstream gene id
SNP gene ids389432
Upstream gene distance
Downstream gene distance
SNP risk allelers1302019-?
SNPsrs1302019
Merged0
SNP id current1302019
Contextintron_variant
Intergenic0
Allele frequency0.022
P value2E-23
Pvalue mlog22.698970004336
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712