SNP Detail For rs13012266
1.Mapping Information
Human SNP ID rs13012266
Human chromosome chr2
Human SNP position 37730337
Pig chromosome chr3
Pig SNP position 108811119
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (HVA/MHPG ratio)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region2p22.2
Chromosome idchr2
Chromosome position37730337
Reported geneintergenic
Mapped geneLOC105374465
Upstream gene id
Downstream gene id
SNP gene ids105374465
Upstream gene distance
Downstream gene distance
SNP risk allelers13012266-C
SNPsrs13012266
Merged0
SNP id current13012266
Contextintron_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.2833
%95 Ciunit increase
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitHVA measurement, MHPG measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005131, http://www.ebi.ac.uk/efo/EFO_0005133
Study accessionGCST001823