SNP Detail For rs13010713
1.Mapping Information
Human SNP ID rs13010713
Human chromosome chr2
Human SNP position 181131318
Pig chromosome chr15
Pig SNP position 96022249
2.Annotation Information
PubMed ID20190752
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20190752
StudyMultiple common variants for celiac disease influencing immune gene expression.
Disease/TraitCeliac disease
Initial sample4,533 European ancestry cases, 10,750 European ancestry controls
Replication sample4,918 European ancestry cases, 5,684 European ancestry controls
Region2q31.3
Chromosome idchr2
Chromosome position181131318
Reported geneITGA4, UBE2E3
Mapped geneLOC101927156
Upstream gene id
Downstream gene id
SNP gene ids101927156
Upstream gene distance
Downstream gene distance
SNP risk allelers13010713-G
SNPsrs13010713
Merged0
SNP id current13010713
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.00000000005
Pvalue mlog10.3010299956639
P value text
Or beta1.13
%95 Ci[1.09-1.18]
PlatformIllumina [292387]
CNVN
Mapped traitceliac disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001060
Study accessionGCST000612