Human SNP ID | rs13006833 |
---|---|
Human chromosome | chr2 |
Human SNP position | 190340773 |
Pig chromosome | chr15 |
Pig SNP position | 106338324 |
PubMed ID | 26352407 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26352407 |
Study | Genome-Wide Association Study with Targeted and Non-targeted NMR Metabolomics Identifies 15 Novel Loci of Urinary Human Metabolic Individuality. |
Disease/Trait | Urinary metabolites |
Initial sample | 3,861 European ancestry individuals |
Replication sample | 1,691European ancestry individuals |
Region | 2q32.2 |
Chromosome id | chr2 |
Chromosome position | 190340773 |
Reported gene | HIBCH |
Mapped gene | HIBCH - LOC105373800 |
Upstream gene id | 26275 |
Downstream gene id | 105373800 |
SNP gene ids | |
Upstream gene distance | 20728 |
Downstream gene distance | 1498 |
SNP risk allele | rs13006833-G |
SNPs | rs13006833 |
Merged | |
SNP id current | 13006833 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.39 |
P value | 2E-20 |
Pvalue mlog | 19.698970004336 |
P value text | (1.067 ppm/1.049 ppm) |
Or beta | 0.0293 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [620456] |
CNV | N |
Mapped trait | urinary metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005116 |
Study accession | GCST003119 |