Human SNP ID | rs129963 |
---|---|
Human chromosome | chr16 |
Human SNP position | 3746146 |
Pig chromosome | chr3 |
Pig SNP position | 39780930 |
PubMed ID | 23459443 |
---|---|
Journal | Pharmacogenomics J |
Link | www.ncbi.nlm.nih.gov/pubmed/23459443 |
Study | Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval. |
Disease/Trait | QT interval (interaction) |
Initial sample | 33,781 European ancestry individuals |
Replication sample | NA |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 3746146 |
Reported gene | CREBBP |
Mapped gene | CREBBP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1387 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs129963-T |
SNPs | rs129963 |
Merged | 0 |
SNP id current | 129963 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.42 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Thiazides) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001890 |