SNP Detail For rs129963
1.Mapping Information
Human SNP ID rs129963
Human chromosome chr16
Human SNP position 3746146
Pig chromosome chr3
Pig SNP position 39780930
2.Annotation Information
PubMed ID23459443
JournalPharmacogenomics J
Linkwww.ncbi.nlm.nih.gov/pubmed/23459443
StudyDrug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval.
Disease/TraitQT interval (interaction)
Initial sample33,781 European ancestry individuals
Replication sampleNA
Region16p13.3
Chromosome idchr16
Chromosome position3746146
Reported geneCREBBP
Mapped geneCREBBP
Upstream gene id
Downstream gene id
SNP gene ids1387
Upstream gene distance
Downstream gene distance
SNP risk allelers129963-T
SNPsrs129963
Merged0
SNP id current129963
Contextintron_variant
Intergenic0
Allele frequency0.42
P value0.000009
Pvalue mlog5.04575749056067
P value text(Thiazides)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitQT interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004682
Study accessionGCST001890