SNP Detail For rs12987661
1.Mapping Information
Human SNP ID rs12987661
Human chromosome chr2
Human SNP position 69586326
Pig chromosome chr3
Pig SNP position 76279506
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Dihydroxy docosatrienoic acid)
Initial sample1,260 African American individuals
Replication sampleNA
Region2p13.3
Chromosome idchr2
Chromosome position69586326
Reported geneAAK1
Mapped geneAAK1
Upstream gene id
Downstream gene id
SNP gene ids22848
Upstream gene distance
Downstream gene distance
SNP risk allelers12987661-C
SNPsrs12987661
Merged0
SNP id current12987661
Contextintron_variant
Intergenic0
Allele frequency
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.13
%95 Ci[0.07-0.18] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitdihydroxy docosatrienoic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005275
Study accessionGCST002120