Human SNP ID | rs12960119 |
---|---|
Human chromosome | chr18 |
Human SNP position | 26034739 |
Pig chromosome | chr6 |
Pig SNP position | 103689706 |
PubMed ID | 23585552 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23585552 |
Study | Genome-wide association study identifies genetic risk underlying primary rhegmatogenous retinal detachment. |
Disease/Trait | Rhegmatogenous retinal detachment |
Initial sample | 867 European ancestry cases, 1,953 European ancestry controls |
Replication sample | 1,966 European ancestry cases, 5,918 European ancestry controls |
Region | 18q11.2 |
Chromosome id | chr18 |
Chromosome position | 26034739 |
Reported gene | TAF4B, SS18, PSMA8 |
Mapped gene | SS18 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6760 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12960119-G |
SNPs | rs12960119 |
Merged | 0 |
SNP id current | 12960119 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.075 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.26 |
%95 Ci | [1.14-1.39] |
Platform | Illumina [299737] |
CNV | N |
Mapped trait | rhegmatogenous retinal detachment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005240 |
Study accession | GCST001966 |