SNP Detail For rs12949468
1.Mapping Information
Human SNP ID rs12949468
Human chromosome chr17
Human SNP position 62516455
Pig chromosome chr7
Pig SNP position 35115800
2.Annotation Information
PubMed ID25918517
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25918517
StudyGenetics of aging, health, and survival: dynamic regulation of human longevity related traits.
Disease/TraitLifespan
Initial sample679 female individuals
Replication sample432 male individuals
Region17q23.2
Chromosome idchr17
Chromosome position62516455
Reported geneTLK2
Mapped geneRPS10P26, TLK2
Upstream gene id
Downstream gene id
SNP gene ids100271548, 11011
Upstream gene distance
Downstream gene distance
SNP risk allelers12949468-?
SNPsrs12949468
Merged0
SNP id current12949468
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.157
P value5E-20
Pvalue mlog19.3010299956639
P value text(females)
Or beta9.226
%95 Ci[NR] unit decrease
PlatformAffymetrix [429783]
CNVN
Mapped traitlongevity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004300
Study accessionGCST002846