SNP Detail For rs12936361
1.Mapping Information
Human SNP ID rs12936361
Human chromosome chr17
Human SNP position 70112276
Pig chromosome JH118414-1
Pig SNP position 147111
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (DPAL)
Initial sampleup to 2,501 European ancestry individuals
Replication sampleNA
Region17q24.3
Chromosome idchr17
Chromosome position70112276
Reported geneKCNJ16
Mapped geneKCNJ16
Upstream gene id
Downstream gene id
SNP gene ids3773
Upstream gene distance
Downstream gene distance
SNP risk allelers12936361-T
SNPsrs12936361
Merged0
SNP id current12936361
Contextintron_variant
Intergenic0
Allele frequency0.83
P value0.000005
Pvalue mlog5.30102999566398
P value text(Age 20-60 years)
Or beta0.2338
%95 Ci[0.13-0.33] unit increase
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002129