SNP Detail For rs12933472
1.Mapping Information
Human SNP ID rs12933472
Human chromosome chr16
Human SNP position 82891080
Pig chromosome chr6
Pig SNP position 6108103
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region16q23.3
Chromosome idchr16
Chromosome position82891080
Reported geneCDH13
Mapped geneCDH13
Upstream gene id
Downstream gene id
SNP gene ids1012
Upstream gene distance
Downstream gene distance
SNP risk allelers12933472-?
SNPsrs12933472
Merged0
SNP id current12933472
Contextintron_variant
Intergenic0
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text(SG)
Or beta0.12
%95 Ci[0.061-0.179] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitglucose homeostasis measurement, glucose effectiveness measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833
Study accessionGCST002726