Human SNP ID | rs12933472 |
---|---|
Human chromosome | chr16 |
Human SNP position | 82891080 |
Pig chromosome | chr6 |
Pig SNP position | 6108103 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 16q23.3 |
Chromosome id | chr16 |
Chromosome position | 82891080 |
Reported gene | CDH13 |
Mapped gene | CDH13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1012 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12933472-? |
SNPs | rs12933472 |
Merged | 0 |
SNP id current | 12933472 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (SG) |
Or beta | 0.12 |
%95 Ci | [0.061-0.179] unit decrease |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | glucose homeostasis measurement, glucose effectiveness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833 |
Study accession | GCST002726 |