Human SNP ID | rs12924903 |
---|---|
Human chromosome | chr16 |
Human SNP position | 30917649 |
Pig chromosome | chr3 |
Pig SNP position | 17779416 |
PubMed ID | 26626624 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26626624 |
Study | Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. |
Disease/Trait | Psoriatic arthritis |
Initial sample | 1,946 European ancestry cases, 4,934 European ancestry controls |
Replication sample | up to 2,883 European ancestry cases, up to 14,179 European ancestry controls |
Region | 16p11.2 |
Chromosome id | chr16 |
Chromosome position | 30917649 |
Reported gene | FBXL19, PRSS53 |
Mapped gene | CTF2P - FBXL19-AS1 |
Upstream gene id | 100289419 |
Downstream gene id | 283932 |
SNP gene ids | |
Upstream gene distance | 7341 |
Downstream gene distance | 1670 |
SNP risk allele | rs12924903-A |
SNPs | rs12924903 |
Merged | 0 |
SNP id current | 12924903 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 1.164 |
%95 Ci | NR |
Platform | Illumina [11532644] (imputed) |
CNV | N |
Mapped trait | psoriatic arthritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003778 |
Study accession | GCST003270 |