SNP Detail For rs12924903
1.Mapping Information
Human SNP ID rs12924903
Human chromosome chr16
Human SNP position 30917649
Pig chromosome chr3
Pig SNP position 17779416
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriatic arthritis
Initial sample1,946 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 2,883 European ancestry cases, up to 14,179 European ancestry controls
Region16p11.2
Chromosome idchr16
Chromosome position30917649
Reported geneFBXL19, PRSS53
Mapped geneCTF2P - FBXL19-AS1
Upstream gene id100289419
Downstream gene id283932
SNP gene ids
Upstream gene distance7341
Downstream gene distance1670
SNP risk allelers12924903-A
SNPsrs12924903
Merged0
SNP id current12924903
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.164
%95 CiNR
PlatformIllumina [11532644] (imputed)
CNVN
Mapped traitpsoriatic arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003778
Study accessionGCST003270