Human SNP ID | rs1292011 |
---|---|
Human chromosome | chr12 |
Human SNP position | 115398717 |
Pig chromosome | chr14 |
Pig SNP position | 39161742 |
PubMed ID | 23535729 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23535729 |
Study | Large-scale genotyping identifies 41 new loci associated with breast cancer risk. |
Disease/Trait | Breast cancer |
Initial sample | 10,052 European ancestry cases, 12,575 European ancestry controls |
Replication sample | 45,290 European ancestry cases, 41,880 European ancestry controls |
Region | 12q24.21 |
Chromosome id | chr12 |
Chromosome position | 115398717 |
Reported gene | intergenic |
Mapped gene | LOC105370003 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105370003 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1292011-A |
SNPs | rs1292011 |
Merged | 0 |
SNP id current | 1292011 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 9E-22 |
Pvalue mlog | 21.0457574905606 |
P value text | |
Or beta | 1.09 |
%95 Ci | [1.06-1.11] |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001937 |