SNP Detail For rs12912184
1.Mapping Information
Human SNP ID rs12912184
Human chromosome chr15
Human SNP position 92314871
Pig chromosome chr7
Pig SNP position 92546834
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking initiation
Initial sample754 Bangladeshi ancestry never smoker males, 2,565 Bangladeshi ancestry never smoker females, 1,837 Bangladeshi ancestry ever smoker males, 198 Bangladeshi ancestry ever smoker females
Replication sampleNA
Region15q26.1
Chromosome idchr15
Chromosome position92314871
Reported geneST8SIA2, SLCO3A1
Mapped geneNPM1P5 - ST8SIA2
Upstream gene id4874
Downstream gene id8128
SNP gene ids
Upstream gene distance27637
Downstream gene distance79039
SNP risk allelers12912184-?
SNPsrs12912184
Merged0
SNP id current12912184
Contextintron_variant
Intergenic1
Allele frequency
P value0.00000009
Pvalue mlog7.04575749056067
P value text(females)
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST002396