Human SNP ID | rs12899449 |
---|---|
Human chromosome | chr15 |
Human SNP position | 38703290 |
Pig chromosome | chr1 |
Pig SNP position | 147980342 |
PubMed ID | 18711365 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18711365 |
Study | Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 4,387 European ancestry cases, 6,209 European ancestry controls |
Replication sample | NA |
Region | 15q14 |
Chromosome id | chr15 |
Chromosome position | 38703290 |
Reported gene | C15orf53, RASGRP1 |
Mapped gene | C15orf53 - LOC105370776 |
Upstream gene id | 400359 |
Downstream gene id | 105370776 |
SNP gene ids | |
Upstream gene distance | 3252 |
Downstream gene distance | 26453 |
SNP risk allele | rs12899449-? |
SNPs | rs12899449 |
Merged | 0 |
SNP id current | 12899449 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.72 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 1.2 |
%95 Ci | [NR] |
Platform | Affymetrix [1769948] (imputed) |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000220 |