Human SNP ID | rs12882679 |
---|---|
Human chromosome | chr14 |
Human SNP position | 79380895 |
Pig chromosome | chr7 |
Pig SNP position | 108565264 |
PubMed ID | 25133637 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25133637 |
Study | Genome-wide association studies and heritability estimates of body mass index related phenotypes in bangladeshi adults. |
Disease/Trait | Underweight status |
Initial sample | 953 Bangladeshi ancestry underweight females, 1,269 Bangladeshi ancestry normal weight females, 1,146 Bangladeshi ancestry underweight males, 1,106 normal weight males |
Replication sample | NA |
Region | 14q31.1 |
Chromosome id | chr14 |
Chromosome position | 79380895 |
Reported gene | NRXN3 |
Mapped gene | NRXN3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9369 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12882679-G |
SNPs | rs12882679 |
Merged | 0 |
SNP id current | 12882679 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.687 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.057 |
%95 Ci | [0.033-0.081] unit increase |
Platform | Illumina [1208102] (imputed) |
CNV | N |
Mapped trait | underweight body mass index status |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005936 |
Study accession | GCST002569 |