SNP Detail For rs1286664
1.Mapping Information
Human SNP ID rs1286664
Human chromosome chr3
Human SNP position 25487789
Pig chromosome chr13
Pig SNP position 14009630
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p24.2
Chromosome idchr3
Chromosome position25487789
Reported geneRARB
Mapped geneRARB
Upstream gene id
Downstream gene id
SNP gene ids5915
Upstream gene distance
Downstream gene distance
SNP risk allelers1286664-T
SNPsrs1286664
Merged0
SNP id current1286664
Contextintron_variant
Intergenic0
Allele frequency0.649
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.01
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264