Human SNP ID | rs12828102 |
---|---|
Human chromosome | chr12 |
Human SNP position | 90916242 |
Pig chromosome | chr5 |
Pig SNP position | 96393605 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-3 polyunsaturated fatty acid levels (alphalinolenic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 12q21.33 |
Chromosome id | chr12 |
Chromosome position | 90916242 |
Reported gene | NR |
Mapped gene | LOC105369895 - LINC00615 |
Upstream gene id | 105369895 |
Downstream gene id | 439916 |
SNP gene ids | |
Upstream gene distance | 107091 |
Downstream gene distance | 1781 |
SNP risk allele | rs12828102-G |
SNPs | rs12828102 |
Merged | |
SNP id current | 12828102 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.93705655 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.1645 |
%95 Ci | [0.092-0.237] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003242 |