Human SNP ID | rs12807809 |
---|---|
Human chromosome | chr11 |
Human SNP position | 124736389 |
Pig chromosome | chr9 |
Pig SNP position | 57481506 |
PubMed ID | 19571808 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/19571808 |
Study | Common variants conferring risk of schizophrenia. |
Disease/Trait | Schizophrenia |
Initial sample | 2,663 European ancestry cases, 13,498 European ancestry controls |
Replication sample | 10,282 European ancestry cases, 21,093 European ancestry controls |
Region | 11q24.2 |
Chromosome id | chr11 |
Chromosome position | 124736389 |
Reported gene | NRGN |
Mapped gene | SPA17 - NRGN |
Upstream gene id | 53340 |
Downstream gene id | 4900 |
SNP gene ids | |
Upstream gene distance | 38844 |
Downstream gene distance | 3544 |
SNP risk allele | rs12807809-T |
SNPs | rs12807809 |
Merged | 0 |
SNP id current | 12807809 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.83 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 1.15 |
%95 Ci | [NR] |
Platform | Illumina [314868] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST000435 |