Human SNP ID | rs12777 |
---|---|
Human chromosome | chr5 |
Human SNP position | 132335969 |
Pig chromosome | chr2 |
Pig SNP position | 140037344 |
PubMed ID | 26561523 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26561523 |
Study | A meta-analysis of 120,246 individuals identifies 18 new loci for fibrinogen concentration. |
Disease/Trait | Fibrinogen levels |
Initial sample | 120,246 European ancestry individuals |
Replication sample | NA |
Region | 5q31.1 |
Chromosome id | chr5 |
Chromosome position | 132335969 |
Reported gene | SLC22A4 |
Mapped gene | LOC553103, SLC22A4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 553103, 6583 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12777-G |
SNPs | rs12777 |
Merged | 0 |
SNP id current | 12777 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.044 |
P value | 9E-27 |
Pvalue mlog | 26.0457574905606 |
P value text | |
Or beta | 0.024 |
%95 Ci | NR unit increase |
Platform | Affymetrix, Illumina [~ 10700000] (imputed) |
CNV | N |
Mapped trait | fibrinogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004623 |
Study accession | GCST003194 |