Human SNP ID | rs12757404 |
---|---|
Human chromosome | chr1 |
Human SNP position | 214456273 |
Pig chromosome | chr9 |
Pig SNP position | 141971269 |
PubMed ID | 24386095 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24386095 |
Study | A genome wide association study identifies common variants associated with lipid levels in the Chinese population. |
Disease/Trait | Lipid traits |
Initial sample | 3,451 Han Chinese ancestry individuals |
Replication sample | 8,830 Han Chinese ancestry individuals |
Region | 1q41 |
Chromosome id | chr1 |
Chromosome position | 214456273 |
Reported gene | PTPN14 |
Mapped gene | PTPN14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5784 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12757404-A |
SNPs | rs12757404 |
Merged | 0 |
SNP id current | 12757404 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (TG) |
Or beta | 0.01 |
%95 Ci | mmol/L decrease |
Platform | Affymetrix, Illumina [up to 2249917] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST002321 |