Human SNP ID | rs12742923 |
---|---|
Human chromosome | chr1 |
Human SNP position | 83024161 |
Pig chromosome | chr6 |
Pig SNP position | 120892070 |
PubMed ID | 22628157 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22628157 |
Study | Genome-wide association study of neurocognitive impairment and dementia in HIV-infected adults. |
Disease/Trait | HIV-associated dementia |
Initial sample | 1,287 European ancestry HIV-infected male individuals |
Replication sample | NA |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 83024161 |
Reported gene | intergenic |
Mapped gene | LINC01362 - LOC105378817 |
Upstream gene id | 103283057 |
Downstream gene id | 105378817 |
SNP gene ids | |
Upstream gene distance | 26578 |
Downstream gene distance | 41767 |
SNP risk allele | rs12742923-T |
SNPs | rs12742923 |
Merged | 0 |
SNP id current | 12742923 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (NCI) |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | AIDS dementia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002608 |
Study accession | GCST001542 |