Human SNP ID | rs12738007 |
---|---|
Human chromosome | chr1 |
Human SNP position | 29195193 |
Pig chromosome | chr6 |
Pig SNP position | 79988002 |
PubMed ID | 26531332 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26531332 |
Study | Genome-wide association study with the risk of schizophrenia in a Korean population. |
Disease/Trait | Schizophrenia |
Initial sample | 350 Korean ancestry cases, 700 Korean ancestry controls |
Replication sample | 310 Korean ancestry cases, 604 Korean ancestry controls |
Region | 1p35.3 |
Chromosome id | chr1 |
Chromosome position | 29195193 |
Reported gene | MECR, SRSF4 |
Mapped gene | MECR |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51102 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12738007-? |
SNPs | rs12738007 |
Merged | |
SNP id current | 12738007 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.056 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.9 |
%95 Ci | [1.44-2.46] |
Platform | Illumina [620001] |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003190 |