Human SNP ID | rs12726330 |
---|---|
Human chromosome | chr1 |
Human SNP position | 155135691 |
Pig chromosome | chr4 |
Pig SNP position | 103448253 |
PubMed ID | 22451204 |
---|---|
Journal | Ann Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/22451204 |
Study | Meta-analysis of Parkinson__s disease: identification of a novel locus, RIT2. |
Disease/Trait | Parkinson__s disease |
Initial sample | 4,238 European ancestry cases, 4,239 European ancestry controls |
Replication sample | 3,738 European ancestry cases, 2,111 European ancestry controls |
Region | 1q22 |
Chromosome id | chr1 |
Chromosome position | 155135691 |
Reported gene | GBA |
Mapped gene | SLC50A1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55974 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12726330-? |
SNPs | rs12726330 |
Merged | 0 |
SNP id current | 12726330 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | 1.71 |
%95 Ci | [NR] |
Platform | Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | Parkinson__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508 |
Study accession | GCST001430 |