SNP Detail For rs12726330
1.Mapping Information
Human SNP ID rs12726330
Human chromosome chr1
Human SNP position 155135691
Pig chromosome chr4
Pig SNP position 103448253
2.Annotation Information
PubMed ID22451204
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/22451204
StudyMeta-analysis of Parkinson__s disease: identification of a novel locus, RIT2.
Disease/TraitParkinson__s disease
Initial sample4,238 European ancestry cases, 4,239 European ancestry controls
Replication sample3,738 European ancestry cases, 2,111 European ancestry controls
Region1q22
Chromosome idchr1
Chromosome position155135691
Reported geneGBA
Mapped geneSLC50A1
Upstream gene id
Downstream gene id
SNP gene ids55974
Upstream gene distance
Downstream gene distance
SNP risk allelers12726330-?
SNPsrs12726330
Merged0
SNP id current12726330
Contextsplice_region_variant
Intergenic0
Allele frequencyNR
P value0.00000005
Pvalue mlog7.30102999566398
P value text
Or beta1.71
%95 Ci[NR]
PlatformIllumina [2500000] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001430