Human SNP ID | rs12725198 |
---|---|
Human chromosome | chr1 |
Human SNP position | 15753676 |
Pig chromosome | chr6 |
Pig SNP position | 69379655 |
PubMed ID | 23247143 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23247143 |
Study | Association of genome-wide variation with highly sensitive cardiac troponin-T levels in European Americans and Blacks: a meta-analysis from atherosclerosis risk in communities and cardiovascular health studies. |
Disease/Trait | Cardiac Troponin-T levels |
Initial sample | 9,491 European ancestry individuals, up to 2,053 African American individuals |
Replication sample | NA |
Region | 1p36.21 |
Chromosome id | chr1 |
Chromosome position | 15753676 |
Reported gene | FBLIM1 |
Mapped gene | TMEM82 - FBLIM1 |
Upstream gene id | 388595 |
Downstream gene id | 54751 |
SNP gene ids | |
Upstream gene distance | 5879 |
Downstream gene distance | 2495 |
SNP risk allele | rs12725198-A |
SNPs | rs12725198 |
Merged | 0 |
SNP id current | 12725198 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Dichotomous variable) |
Or beta | 1.85 |
%95 Ci | [1.43-2.39] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | cardiac troponin T measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005043 |
Study accession | GCST001776 |