SNP Detail For rs12714668
1.Mapping Information
Human SNP ID rs12714668
Human chromosome chr3
Human SNP position 86841696
Pig chromosome chr13
Pig SNP position 179842946
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (arachidonic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region3p12.1
Chromosome idchr3
Chromosome position86841696
Reported geneNR
Mapped geneLOC101927518 - LOC105377196
Upstream gene id101927518
Downstream gene id105377196
SNP gene ids
Upstream gene distance104436
Downstream gene distance62388
SNP risk allelers12714668-C
SNPsrs12714668
Merged
SNP id current12714668
Contextintergenic_variant
Intergenic1
Allele frequency0.6896
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.0433
%95 Ci[0.024-0.062] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitarachidonic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006808
Study accessionGCST003236