Human SNP ID | rs12702919 |
---|---|
Human chromosome | chr7 |
Human SNP position | 9510942 |
Pig chromosome | chr9 |
Pig SNP position | 87461234 |
PubMed ID | 24324551 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24324551 |
Study | Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. |
Disease/Trait | PR interval in Tripanosoma cruzi seropositivity |
Initial sample | 580 Brazilian ancestry individuals |
Replication sample | NA |
Region | 7p21.3 |
Chromosome id | chr7 |
Chromosome position | 9510942 |
Reported gene | NR |
Mapped gene | RPL9P19 - GAPDHP68 |
Upstream gene id | 100129634 |
Downstream gene id | 100132601 |
SNP gene ids | |
Upstream gene distance | 571488 |
Downstream gene distance | 103966 |
SNP risk allele | rs12702919-? |
SNPs | rs12702919 |
Merged | 0 |
SNP id current | 12702919 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5486770] (imputed) |
CNV | N |
Mapped trait | PR interval, Trypanosoma cruzi seropositivity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530 |
Study accession | GCST002279 |