SNP Detail For rs12680842
1.Mapping Information
Human SNP ID rs12680842
Human chromosome chr8
Human SNP position 94570378
Pig chromosome chr4
Pig SNP position 45517434
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region8q22.1
Chromosome idchr8
Chromosome position94570378
Reported geneKIAA1429
Mapped geneLOC101926977
Upstream gene id
Downstream gene id
SNP gene ids101926977
Upstream gene distance
Downstream gene distance
SNP risk allelers12680842-A
SNPsrs12680842
Merged0
SNP id current12680842
Contextdownstream_gene_variant
Intergenic0
Allele frequency0.666
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.015
%95 Ci[0.0085-0.0211] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783