Human SNP ID | rs12676965 |
---|---|
Human chromosome | chr8 |
Human SNP position | 37823908 |
Pig chromosome | chr15 |
Pig SNP position | 55704915 |
PubMed ID | 24144296 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24144296 |
Study | Nine loci for ocular axial length identified through genome-wide association studies, including shared loci with refractive error. |
Disease/Trait | Axial length |
Initial sample | 12,531 European ancestry individuals |
Replication sample | 8,216 Asian ancestry individuals |
Region | 8p11.23 |
Chromosome id | chr8 |
Chromosome position | 37823908 |
Reported gene | GPR124, RAB11FIP1, PROSC, ERLIN2, BRF2 |
Mapped gene | ADGRA2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 25960 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs12676965-T |
SNPs | rs12676965 |
Merged | 0 |
SNP id current | 12676965 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.8224 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.062 |
%95 Ci | [0.036-0.088] unit increase |
Platform | Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | axial length measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005318 |
Study accession | GCST002115 |