SNP Detail For rs12676965
1.Mapping Information
Human SNP ID rs12676965
Human chromosome chr8
Human SNP position 37823908
Pig chromosome chr15
Pig SNP position 55704915
2.Annotation Information
PubMed ID24144296
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24144296
StudyNine loci for ocular axial length identified through genome-wide association studies, including shared loci with refractive error.
Disease/TraitAxial length
Initial sample12,531 European ancestry individuals
Replication sample8,216 Asian ancestry individuals
Region8p11.23
Chromosome idchr8
Chromosome position37823908
Reported geneGPR124, RAB11FIP1, PROSC, ERLIN2, BRF2
Mapped geneADGRA2
Upstream gene id
Downstream gene id
SNP gene ids25960
Upstream gene distance
Downstream gene distance
SNP risk allelers12676965-T
SNPsrs12676965
Merged0
SNP id current12676965
Contextintron_variant
Intergenic0
Allele frequency0.8224
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.062
%95 Ci[0.036-0.088] unit increase
PlatformIllumina [2500000] (imputed)
CNVN
Mapped traitaxial length measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005318
Study accessionGCST002115